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Domain assignment for gi|59712812|ref|YP_205588.1| from Vibrio fischeri ES114

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|59712812|ref|YP_205588.1|
Domain Number 1 Region: 102-311
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, catalytic domain 8.11e-54
Family MurCDEF 0.00000122
Further Details:      
 
Domain Number 2 Region: 314-448
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, peptide-binding domain 1.8e-33
Family MurCDEF C-terminal domain 0.0002
Further Details:      
 
Domain Number 3 Region: 1-95
Classification Level Classification E-value
Superfamily MurE/MurF N-terminal domain 4.97e-26
Family MurE/MurF N-terminal domain 0.00018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|59712812|ref|YP_205588.1|
Sequence length 452
Comment UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Vibrio fischeri ES114]
Sequence
MITMLLSEIAKACDGRLVGADCQISSVSTDSRHIDEEGLFVALIGERFDAHDFIPAVQEQ
GATALLVSKEVDTTLPQVIVSDTQKALGLVAKHVHQVCHTFTFALTGSCGKTTVKEMLAS
ILTRSGEVLATAGNFNNEIGVPLTLLRSQPSNDFAVIELGANHQNEISYTTQLAQPNVAL
VNNIAAAHLEGFGSIEGVAKAKGEIFEGLQENGIAIYNLDSNGLPKWSSLFEGKQVVSFA
MDDSSADFYASNIEVNAIGEPSFQLNTPKGNIQVSLGIIGKHNVANAVAAAALAIQAHAS
LNDIQQGLQELGSVKGRVAVETLASGLKVIDDTYNASVPAMKAAVDLLGGFKGQRWLVLG
NMAELGEESLALHREVGEYAAPYQFEQVVTFGDDTKVISELCNGRHFETRSDLNAYLLKE
LQLIKHNEVTVLVKGANSSRMSEVVSALKECQ
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Identical sequences Q5E2P6
312309.VF_2205 gi|59712812|ref|YP_205588.1| WP_011262635.1.76652 YP_205588.1.56684

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