SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSPCAP00000000074 from Procavia capensis 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPCAP00000000074
Domain Number 1 Region: 326-421
Classification Level Classification E-value
Superfamily Fibronectin type III 1.83e-21
Family Fibronectin type III 0.0018
Further Details:      
 
Domain Number 2 Region: 429-619
Classification Level Classification E-value
Superfamily Fibronectin type III 1.36e-18
Family Fibronectin type III 0.0025
Further Details:      
 
Domain Number 3 Region: 639-821
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000326
Family Fibronectin type III 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPCAP00000000074   Gene: ENSPCAG00000000075   Transcript: ENSPCAT00000000079
Sequence length 1088
Comment pep:known_by_projection genescaffold:proCap1:GeneScaffold_5280:253732:309625:-1 gene:ENSPCAG00000000075 transcript:ENSPCAT00000000079 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TMDNFFCLRWPPQMVDTKRMKTSSNFLWLLSSFVLLCLVGKANSQKKGSPHGLKCVTNHL
TVWDCSWKALSGHGSYEACIGSRSNSCYPLEKTNVKIPALSPGDHEISINPLFDSGHRTK
FILSEKNISLIPDTPEILNLSPDFSTSTLHIKWNDKGSVFPHHSAVIWQIKILRTKRMEV
VALVTHNTTLNGNDKIHRWSWTSDMPLECAIHSVRMRCYIDDVRFSGHKEWSDWSPAKNI
SWLPKYEPMVFPRDKVVLVGSDITFCCLIQEEVILAQFGREKCPIIHLDGENVAIRIYNV
SVSDSSGTNVVFTADTNMGGTVIFAGYPPDDPQKLNCETHDLKAITCTWDPGRDTGLSGL
HNTSYTLFERFSGKNVTFKRDEKTENVSYQLLFHIIPKQEIYNFTLSAHNPLGQSESSVL
VNITERVHPHTPASFRVKDANATAVTLSWHLLGSFAKISLVCQIEITKRNAVPELRNVTV
KGVENSSYFMVVDKLNPYTNYTFRIRCSSKTFWKWSSWTSGKQHLTIEAIPSNGPDTWRE
WSSDGKNLIIYWKPLPINEANGRILSYNVSCSSDEETQSLSEIPDRQHRAELQLDRNDYI
ISVVAKNSAGSSPPSKIPSMEIPHDDLQVEQAVGMGKGIFLTWNHDPNMTCDYVIKWCNS
SHPGPCLMDWKKVPSNSTEAVIESDQFQPGVRYNFFLYGCRNQGYQLLRSIMGYTPIVAP
NFTVEDTSADSILVKWEDIPVEELRGFLRGYLFYFGKGERGTSKMRGLGSGHSDIKVKNI
TDISQKTLKIADLQGKTSYHLVLRAYTDGGISPEKSMYVVTKENSVGLIIAILIPVAVAV
IVVTSILCYRKREWIKETFYPDIPNPENCKALQFEKSVSEGNNTLKTLEMNPCTPNNVEV
LETRSVVPKIEDTEIISPVAERPEDSTEAGHENHVAVSYCPPIIEEEISNSMADEAGGTS
QVIYIDVQSMYQPQAKPEEESENEHVVGSGYKPQMHLPVTSPVEDLTAEDDLDDTAGYRP
QANVSTWNLVSPDSPQSTDSNSEIVSFGSPCSINSRQFLLPPKDDDDSPKSSGGGWSFTN
FFQSKPND
Download sequence
Identical sequences ENSPCAP00000000074 ENSPCAP00000000074

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