SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSVPAP00000004877 from Vicugna pacos 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSVPAP00000004877
Domain Number 1 Region: 354-544
Classification Level Classification E-value
Superfamily CAPPD, an extracellular domain of amyloid beta A4 protein 3.14e-66
Family CAPPD, an extracellular domain of amyloid beta A4 protein 0.0000000289
Further Details:      
 
Domain Number 2 Region: 10-104
Classification Level Classification E-value
Superfamily A heparin-binding domain 6.93e-45
Family A heparin-binding domain 0.00000153
Further Details:      
 
Domain Number 3 Region: 105-169
Classification Level Classification E-value
Superfamily Amyloid beta a4 protein copper binding domain (domain 2) 2.48e-29
Family Amyloid beta a4 protein copper binding domain (domain 2) 0.00001
Further Details:      
 
Domain Number 4 Region: 265-323
Classification Level Classification E-value
Superfamily BPTI-like 6.67e-21
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0000814
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSVPAP00000004877   Gene: ENSVPAG00000005253   Transcript: ENSVPAT00000005253
Sequence length 749
Comment pep:known_by_projection genescaffold:vicPac1:GeneScaffold_1746:8847:231952:-1 gene:ENSVPAG00000005253 transcript:ENSVPAT00000005253 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPE
LQITNVVEANQPVTIQNWCKRGRKQCKTHAHIVIPYRCLVGEFVSDALLVPDKCKFLHQE
RMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEENDNIDSA
DAEEDDSDVWWGGADTDYAHGSEDKVVEVAEEEEVADVEEEEAEDDEDDEDGEDEEEADE
SYKEATRTTSIATTTTATTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFY
GGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEPLPQDPVKLPTTAASTPDAVDKYLET
PGDENEHAHFQKAKERLEAKHRERMSQXXXXXXXXXXXXXXXXXXXXXXXXXHFQEKVES
LEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAE
QKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDE
VDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPW
HPFGVDSVPANTENEXXXXXXXXXXXXXXXXXXXSGLTNIKTEEISEVKMDAEFRHDSGY
EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAA
VTPEERHLSKMQQNGYENPTYKFFEQMQN
Download sequence
Identical sequences ENSVPAP00000004877 ENSVPAP00000004877

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]