SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSVPAP00000005055 from Vicugna pacos 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSVPAP00000005055
Domain Number 1 Region: 665-834
Classification Level Classification E-value
Superfamily SET domain 2.45e-38
Family Histone lysine methyltransferases 0.00042
Further Details:      
 
Domain Number 2 Region: 597-671
Classification Level Classification E-value
Superfamily DNA-binding domain 0.000000000000556
Family Methyl-CpG-binding domain, MBD 0.017
Further Details:      
 
Weak hits

Sequence:  ENSVPAP00000005055
Domain Number - Region: 259-310
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.00307
Family Tudor domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSVPAP00000005055   Gene: ENSVPAG00000005440   Transcript: ENSVPAT00000005440
Sequence length 1224
Comment pep:known_by_projection genescaffold:vicPac1:GeneScaffold_2986:736288:763446:1 gene:ENSVPAG00000005440 transcript:ENSVPAT00000005440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRKFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPTAPPAPPAPPAPPLSPQAGDNDLESQ
LAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQAYRSPLGSTPSTPAP
PAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNP
LLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFC
LDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFI
NTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQVNPNSGYQYKRLEECLPTGVY
ECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXDILTLFSSSESEGESGTSRKPTAGQTSATAVDSDDIQTISSG
SEGDDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQ
FYDGEESCYIIDAKLEGNLGRYLN
Download sequence
Identical sequences ENSVPAP00000005055 ENSVPAP00000005055

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]