SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for TRIUR3_09120-P1 from Triticum urartu 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  TRIUR3_09120-P1
Domain Number 1 Region: 21-118
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 8.63e-21
Family B3 DNA binding domain 0.0023
Further Details:      
 
Domain Number 2 Region: 425-513
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000000334
Family B3 DNA binding domain 0.0098
Further Details:      
 
Domain Number 3 Region: 234-336
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000628
Family B3 DNA binding domain 0.0091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) TRIUR3_09120-P1
Sequence length 525
Comment pep:novel supercontig:GCA_000347455.1:scaffold120285:17181:19673:1 gene:TRIUR3_09120 transcript:TRIUR3_09120-T1 description:""
Sequence
IDGDMRNSCECCKRYWTHLHGKVKRFITRMDRHSRHSMVIPERFVNYFAWKLSGTIKLEA
PNGNVYDVGITERRNKTVLRSGWEAFVDANHIVESDSLMFRYRGNCRFKVVVFDSSGCEK
VFSCAGMLTNISDQEPSTNSTDISTSFSDGNTHSSARRQSDDCQSGSSGHRRKRAKKDAI
SSPSEDSSGEDSPYEHESSESDGQTLPTPLYVLSGKCYLTEEDDANIVELVQEIQPEMPL
LVAMMRKPISHSAPFSDQVVPKDYALAHFPRKNQTIKLQLPEQSKKWYCEFRVKSDGGHC
SLYDCGFVRDNHLLEGDLCVFQPMPNRKGRTFKVIVHLFRKATIDHPSSENISKRGLPST
KNAPTLCIKEEPNDDEETFSSGHDEHRISKKYLDHDGTEPYMMAMGAELTEVQNKIVLEK
VGAIASDLPIYVAVMTKTSVHVSLTFGTEYTARYLRTGGRNLVLQLEGKSQRWHGKMRDK
KGALRISGGWTSFASENGLRERDICLFELMKNKGELKQKMMVYIL
Download sequence
Identical sequences T1LVR0
TRIUR3_09120-P1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]