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Domain assignment for CJA00331 from Caenorhabditis japonica

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CJA00331
Domain Number 1 Region: 389-606
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.21e-57
Family Tandem AAA-ATPase domain 0.00000794
Further Details:      
 
Domain Number 2 Region: 542-669,697-779
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.22e-39
Family Tandem AAA-ATPase domain 0.00073
Further Details:      
 
Domain Number 3 Region: 189-243
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000000000113
Family Retrovirus zinc finger-like domains 0.0014
Further Details:      
 
Domain Number 4 Region: 287-333
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000000000116
Family Retrovirus zinc finger-like domains 0.00097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CJA00331   Protein: JA30205   Gene: WBGene00119535
Sequence length 825
Comment JA30205 WBGene00119535 status:Partially_confirmed
Sequence
MSETGGWGRSENAPKESTGGGFGGSRGGGFGGGGNSNSGSFGSKPSGFGGGGGGSGFGGG
NSGGGSGFGSGNGGSGFGSGNGGSGFGSGNGGSGFGSGNGGSGFGSGNGGSGFGSGNKES
AFGGGNSGSGFGGGNSGSGFGGGNKGSGFGGGNGGSGFGAGGNSGSGFGAGGFLVLEAAA
ALVSAETMDLPDSERNNNCFNCNQPGHRSNECDQPRKPREGASGNCFNCQQPGHLSRDCP
EERKPREYRGGNGGGFGGGNDFGSSENTRFDGSGGGFGSRSGGFGGGNDEQAPMKCFNCR
EEGHRSSDCPQPPRGCFNCGDAGHRASECTNPRQPREGAEGETPKATYVPEESSMEDIFS
MQRIAEGLMFDKFFDAEVVLTSCGKQSRVPACKRFEDAKLTEKMLSNVTHAGYTRTTPIQ
QYSLPIIRDGGDIMACAQTGSGKTAAFLLPIMSKLIDDNDLNTAGEAGCYPRCIILTPTR
ELADQIYNEGRKFSFQTMVEIKPVYGGLAVNYNRGQLEKGASIIVGTVGRIKHFIEEGII
CLNKIRYFVLDEADRMIDAMGFGADITTIASYPGMPDKKNRQTLMFSATFSDAVQEAARE
FLRPEYMMIAIDKIGAANKCVVQEFQLCEKYEKKDKLLELLGIDIDDYAISKGAQIKSIM
KCWMFFQTRMFIPKRLSSSCHDVQWLIRWQQFSPAHKFLVLLLFIHGAREQRERSEALRQ
FRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFLG
LDCPLIPDLLKVLADAEQIVPEWMVDNHGASAFGANVPTQEEDKW
Download sequence
Identical sequences CJA00331 281687.CJA00331

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