SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for CJA09437 from Caenorhabditis japonica

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  CJA09437
Domain Number 1 Region: 820-959,1178-1320
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.32e-30
Family Tandem AAA-ATPase domain 0.049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CJA09437   Protein: JA34159   Gene: WBGene00128641
Sequence length 1331
Comment JA34159 WBGene00128641 status:Partially_confirmed
Sequence
MYRNNRRENYSNAPPGLDLVPPGLQKHSNAYSNIVSPPPGLSHPSSSRAHENFILDTNKT
PHGLTSLPYHYKLVEILGIRTPPGLNGPAQPQRSTIYNGYDNYDSDSSPENYETEVKGPH
ILAFSDVQAARRQMEDDDYSERGVPIRKNESHMAKYINGSKLYARFDQPFVSITCNLDLL
FVINYAVSSRNKEIRPASKAILSGAFDRGYPVKLKNKFLNRSFKNGRWSYNEVELFFEII
QLYFYTARFKGGFMLSIDSFRPAWTDFHEAFVRTSKDGLRDAKVNAKELGNAERLMNHVN
KWLQQAEDESGSIARPIRSSRDFSPRRVTSSRLSEESRYYVDDHRNRRMANRDDYTSNST
ASYHDGGTEYDRQDRRYEYDDIGRDEVDDVARYRSIESNYGAGTSKTDRMVNLTLENTIR
EQDIEVESSIGEIPNDSSVVNTDERPKQEYKYTEANYEPPWVKSEITEPPEDFKTLTSVP
VLADYVNPTEPYLRRIQEDGIYKSAAHYLDVQFRLHREDLVSPLRDGIDLYRKNGTCRGR
RIEGAPCSDILIFDVDRVDGKQVSEREGLEMRVVWPAKHEISKLLLNDKEMKELGLLMLS
DDGFVNDFHLTFVKSSYLLSRECLHLAILGETAPFKPNKSYQAAEGNSYLPSCKHVLENM
KRINPFKPIPFERYLVHGQVEIFRPLFHRHEKSETQVAEEKRLEVIDNNGINFSGLDIYV
QNEVSKLKKHYGEVRSIAAANRYLKGKPVPKGADDEDDGDDLYYKVRSSTAVDKDLEYEQ
LSEPIFREMLGVNSGGSDQLMIGKKWYRISRLLDDFHPDNFDESQRIAFCQTFRHELSLI
QGPPGTGKTHIGVQIVKTMLQNRSHWRMTEPILIVSYTNRGLDNLLERIWHMIDEDEELS
RDNGKPRMIRYGRNCDSELLKKRCVTKFDVDAQYKSSVADKIQQNLRTAFRNKTVKRNEL
AISSNTLLYSKKDLLSFNILSRVMDPNHQMEISQFASQHVDTKKRLLCPDEAFACWLLDQ
DFGKSVGTKAKNEKMSTFKKLPSNSDDETTPNAPSIDEEDDSDLDDEQFLDNLFKKMNLG
CSKETGVDASLADDASEYYSRGKWEIAYDQNSDLLVLLGRNEKNGGLVDRHIASLVQEVK
EIILSTPPLLSGELEDIKFIFSLARPKRWALYNTWCYKLRNLIAENLPRQIKNYEKACEE
VQKASDRLDAEIMKMPMIIGATTSGCSRLRPILEMVKPRILIVEEAAEVFEAHIISAMIS
SIEHAVMIGDHKQIRPKPAVHELGTEYGLEISMFERLVERGLPFSQLREQHRMNSTIAEL
IVRPALYDKYE
Download sequence
Identical sequences CJA09437 281687.CJA09437

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]