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Domain assignment for CRE18272 from Caenorhabditis remanei

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CRE18272
Domain Number 1 Region: 147-179
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000314
Family Retrovirus zinc finger-like domains 0.0046
Further Details:      
 
Domain Number 2 Region: 221-327
Classification Level Classification E-value
Superfamily Acid proteases 0.0000375
Family Retroviral protease (retropepsin) 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CRE18272   Protein: RP27414   Gene: WBGene00082676
Sequence length 502
Comment RP27414 WBGene00082676 status:Predicted
Sequence
MKTTKLLDEMKEHSIFDVSLQILGSQLRKCPEMEQYELCREEATRFDEEWRSGKAKQNEK
KMNRQQSNQNFSNQQSNYSNQNTSYSRNKQTVGNDETSQNWRERSQGKFVPTNNAGGNNV
VNKSVGFSECSECRLTGCHDPKCSRAPGSSTPRKSNPVVCFRCNEQGHIAPNCPQKSAQQ
LNSQGDMAKVQTLDKKECLEMPEAEKSKQNKNSRTPVRIEQGRIGSAEVNFVIDSGACIS
VISENTWKEVVEKNGGKEWEKEAILKNPEKIDVYAANNTPMNLLYQVKVETSLHSRTRDL
KFYVTDIDRDTVILGIDQFELLGIQMSFQKKPRDIRMVRQVKIPPGSEKIVEVSVEGTIR
KDKSLCLITPMVSCLAPAIYQIRKSGKARVQMSNLGKKSIFLKKGELVASGEVEGFDVIE
ENEENLKLLEEFFERSKLLEQDMETINLIETNVNSGERWDILCEQLKKTCAKSEEEEDVW
KVIKDYQHIFATDDTELGRTNV
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Identical sequences E3NIW9
XP_003091650.1.11157 31234.CRE18272 CRE18272

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