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Domain assignment for CRE28057 from Caenorhabditis remanei

Domain architecture


Domain assignment details

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Strong hits

Sequence:  CRE28057
Domain Number 1 Region: 579-609,692-770
Classification Level Classification E-value
Superfamily SpoIIaa-like 1.35e-18
Family Anti-sigma factor antagonist SpoIIaa 0.0085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GBrowse: CRE28057   Protein: RP45928   Gene: WBGene00056419
Sequence length 867
Comment RP45928 WBGene00056419 locus:Cre-sulp-6 status:Predicted
Sequence
MSLFFDLEFRFSDCDFYSLLPYGTNVIQNYTKSRQSDVPDQTKFDHTYRFNRAYLSHFGK
IAFHIKNIGKWKRKEWCRFAKGLMPITMWLPHYSWKSSLLFDFLEYPSTVPLDYCSFIPG
LAYGMLVGVPPSYGLITGIIGPFVYALFGTSKHASPGSFAIVSLMVGAVVESFGHSVSID
EVDSIPNITKEFCCRENKPKVSDSDAIAIATSVTLLAGLFQILFGLMNAGLLAVWLSDQL
VQGLISGAAVHVLTSQLKSMTGVTNVPPTSEPFQHMQFYVCFFSQIKNIEIPAVIISIVS
VSLLLISAYIIDPWLCKKIPVKFPMELILVIGMTLTVHFTRNTSYHFNVKTVGEVTSGIP
APFVPPMNNLFGMMGSAISIAIISFVIHISLCKLISKKLQYVVSSNQEWFALGLMHSTSS
FFGCFAGGSSLGRTMMQVKCGTKSQLSTIVSSFVLIIFVMGAAGTIEHLPKPVLASIVVV
AMKDLYIQIFTCSTLRDKNFVDYLIFATTFTSVIVLNVNFGLIIGVVFELLTVVLRSQWF
IFIWNSKNYSEIYSRADSALLGRIRGTNHFRRLGLYETTYDIPGIKVFRFDSPLYFANSE
LFVGRIHEACGLNPLIVRGEIAETDKKRKAKEKKKEKADAENQHSKENETSESSPTLLLQ
SLLVSELEVSAHQAKVLDEKQPQLDPDPAVNFETTQLTHIIIDCSAILYVDLMGKDVLID
VYNDYKTIDISVLFTNTQERVRQLFETTNFFDEVPRNRVYVSVADAVDQAELEQRRKNDA
NIVLMKAAPKPTVAPPIAKSVGQKSVPLGDNTLVKTQSSASLVTGVEFSVRDNTAKEGTI
QKKPRVPSKSNIHWDDLDKTQTDSSKR
Download sequence
Identical sequences E3LM34
XP_003114748.1.11157 31234.CRE28057 CRE28057

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