SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|56751561|ref|YP_172262.1| from Synechococcus elongatus PCC 6301

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|56751561|ref|YP_172262.1|
Domain Number 1 Region: 3-376
Classification Level Classification E-value
Superfamily PLP-dependent transferases 5e-102
Family Cystathionine synthase-like 0.0000000227
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|56751561|ref|YP_172262.1|
Sequence length 388
Comment cysteine desulfurase NifS [Synechococcus elongatus PCC 6301]
Sequence
MSKDPIYLDYHATTPVDSRVVTAMQPFWGEQFGNPASRSHRYGLEAAAAVQVARETLATA
IAAQPEELIFCSGATEANNLAIKGVAETQHRKGQHLITVATEHQAVLSPCRYLESLGFQL
TVLPVNSQGLISVEQVAAALRPDTILVSVMAANNEIGVLQPIAAIGALCRDRGVVFHCDA
AQALGRIPFNVSDLNVDLLSLSGHKVYGPKGIGLLYRRSGVAIAPQLHGGSQEQGLRAGT
LAPALIVGFAQATELAIAEQPTETLRLQTLRDRLWQGLQAIGGLHLNGDPQQRLPSNLNF
SIEGIDPSRLIQRIRGAIAVSSGSACSSGNAEPSHVLTAIGRSPDLAHASLRIGLGRFTI
AEEIDRTLEILIAAIQAERSRLTRHKKG
Download sequence
Identical sequences A0A0H3K6I1 Q31K31
1140.Synpcc7942_2558 269084.syc1552_c WP_011243862.1.45845 WP_011243862.1.5740 WP_011243862.1.95485 gi|56751561|ref|YP_172262.1| gi|81301367|ref|YP_401575.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]