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Domain assignment for gi|545629682|ref|YP_008580256.1| from Leifsonia xyli subsp. cynodontis DSM 46306

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|545629682|ref|YP_008580256.1|
Domain Number 1 Region: 121-344
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, catalytic domain 9.5e-58
Family MurCDEF 0.00044
Further Details:      
 
Domain Number 2 Region: 353-510
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, peptide-binding domain 8.77e-41
Family MurCDEF C-terminal domain 0.00037
Further Details:      
 
Domain Number 3 Region: 33-115
Classification Level Classification E-value
Superfamily MurE/MurF N-terminal domain 7.06e-16
Family MurE/MurF N-terminal domain 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|545629682|ref|YP_008580256.1|
Sequence length 514
Comment UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase [Leifsonia xyli subsp. cynodontis DSM 46306]
Sequence
MTGPAPSTLRPEHPVARPLAQLVALFGLDVRGDLDGVEVTGAALASSAVEPGDLYVGVPG
RNAHGAAYAAEAAEAGAIAVLTDGEGADLAAAAGLPIVVTADPRAALGAVAAWIHRTEDN
AATLFGVTGTNGKTSVVYLLYAILGQLGVVAGLTSTAERRIGKHAITSTLTTPEATELHA
LLARMREEGVRAAAIEVSAQALSRHRVDGIEFDVVGFTNLSHDHLDDYTAMPDYFAAKLE
LFQPDRARRGVVTVDSEWGRTLVEQSRIPVTTLSSAAEAEADWTVTVLEESLARTAFALE
GPGGRRLETSVPLLGAYNASNAALAIVMLVESGYDLDAIGAAFERDGGIDAYIPGRAERL
SGDLGPVVFIDYGHTPDAFSSTLAALRRVSAGRIVMVFGADGDRDTTKRADMGAIAARGA
DAVVITDFHPRWEDPAAIRAALLEGARNAVPERELYEVPDPRTAFRTALSLAGEGDVVLY
AGPGHEDYQEAAGERIPYSARDDARLALREAGWL
Download sequence
Identical sequences U3PDP1
gi|545629682|ref|YP_008580256.1| WP_021755146.1.53511

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