SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSARP00000004124 from Sorex araneus 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSARP00000004124
Domain Number 1 Region: 233-434
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 1.86e-43
Family Reprolysin-like 0.0023
Further Details:      
 
Domain Number 2 Region: 526-581
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000000222
Family TSP-1 type 1 repeat 0.00044
Further Details:      
 
Domain Number 3 Region: 945-991
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000667
Family TSP-1 type 1 repeat 0.0017
Further Details:      
 
Domain Number 4 Region: 884-942
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000706
Family TSP-1 type 1 repeat 0.0032
Further Details:      
 
Weak hits

Sequence:  ENSSARP00000004124
Domain Number - Region: 822-839
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0837
Family TSP-1 type 1 repeat 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSARP00000004124   Gene: ENSSARG00000004493   Transcript: ENSSART00000004536
Sequence length 1177
Comment pep:novel genescaffold:COMMON_SHREW1:GeneScaffold_4499:12334:229323:-1 gene:ENSSARG00000004493 transcript:ENSSART00000004536 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
AGNEEMVQIDLPIKNQREYELVTPVSTNLEGRYLSHVLSANHKKRSTRDVSSSSEQLFFN
ITAFGRDFHLRLKPNSQLVAPGAVVEWRETDLGPGNITSPGDDHQPSGISERIWKMEPLQ
TNCAYVGDIMDVPGTSVAISNCDGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXSDLEGLGDLGTLYSNIDQQLNETMRHRRHAGENDYNIEVLLG
VDDSVVRFHGKEHVQNYLLTLMNIVNIYHDESLGVHINVVLVRMIMLGYAKSISLIERGN
PSRSLENVCRWACQQQKSDPKHSEHHDHAIFLTRQDFGPAGMQGYAPVTGMCHPVRSCTL
NHEDGFSSAFVVAHETGHVLGMEHDGQGNRCGDETAMGSVMAPLVQAAFHRYHWSRCSGQ
ELKRYIHSYDCLLDDPFEHNWPKLPELPGINYSMDEQCRFDFGVGYKMCTAFRTFDPCKQ
LWCSHPDNPYFCKTKKGPPLDGTECAAGKWCYKGHCMWKNANQQKQDGNWGSWTKFGSCS
RTCGTGVRFRTRQCNNPMPINGGQDCPGVNFEYQLCSTEECQKHFEDFRAQQCQQRNSHF
EYQNSKHHWLPYEHPDSKKRCHLYCQSKETGDVAYMKQLVHDGTRCSYKDPYSICVRGEC
VKVGCDKEIGSNKVEDKCGVCGGDNSHCRTVKGTFTRTPRKLGYLKMFDIPPGARHVLIQ
EDEASPHILAIKNQATGHYILNGKGEEARSRTFIDLGVEWDYTIEDDIETLHTDGPLHDP
VIVLIIPQENDTRSSLTYKYIIHEDSAPTINNNNVIQEELDTFEWALKSWSQCSKPCGGX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVAEEWEHCTKTCGSS
GYQLRTVRCLQPLHDGTNRSVHSKYCVGDRPESRRPCNRVPCPAQWKTGPWNECSVTCGE
GTEVRQVLCRAGDHCEGEKPESVRACQLPPCNDEPCLGDKSIFCQMEVLARYCSIPGYNK
LCCESCSKRSSTLPPPYLPEAAEAHDDALFNPSDLPGSLLMPTPLAPHQSEGPAEKKEPL
RRISPAGGPNAYAAFQPNSKPDGATLPQRRSQQTARKTVRLLSPPTKGAHLNSSSQPAAA
RFLAVSDALGAAQTRTSTNDEKMIDKRRPVRSVTLLR
Download sequence
Identical sequences ENSSARP00000004124 ENSSARP00000004124

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]