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Domain assignment for gi|148228452|ref|NP_001082554| from Xenopus laevis

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|148228452|ref|NP_001082554|
Domain Number 1 Region: 4-597
Classification Level Classification E-value
Superfamily Prokaryotic type I DNA topoisomerase 1.57e-156
Family Prokaryotic type I DNA topoisomerase 0.0000114
Further Details:      
 
Weak hits

Sequence:  gi|148228452|ref|NP_001082554|
Domain Number - Region: 624-647,706-751
Classification Level Classification E-value
Superfamily Multiheme cytochromes 0.0921
Family Cytochrome c3-like 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|148228452|ref|NP_001082554|
Sequence length 858
Comment topoisomerase (DNA) III beta [Xenopus laevis]
Sequence
MKTVLMVAEKPSLAQSIAKILSRGNASSRKGLNGACSVHEYTGSFMGQNVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEGRSCDYVVLWLDCDK
EGENICFEVLDAIHPVMNKAHGGERTVYRAKFSSITDTDILNAMNRLGEPNKNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQVKVSHGQEHPLSLDWDRVRVFDREIAQMFINITKTAKEAQVESVSKKEKAKQRPQA
LNTVEMLRVASSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGTLKQQANN
PFWADTVKTLLAEGINRPRKGADAGDHPPITPMRSATESELGGDAWRLYEYITRHFIATI
SHDCKYLQTSIAFSVGPEMFTTTCKEVISPGFTEIMPWQGIPKEESFESCQRGDKFSVDE
MKLVEKQTCPPDYLTEAELITLMEKHGIGTDASIPVHINNVCQRNYVTVESGRRLKPTSL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKANFQQVLDHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHTPFRDMKKGMGCNECTHPTCQHSLSM
LGIAQCVECESGVMVLDSTSGPKWKMACNKCNVIVHFFENAHRVRVSAETCEACDAALVH
VDFNKAKSPLPADQTQHTGCVFCDSVFQDLVELKHATMKHPMHKGGQGRRQGRGRGRGRR
PNPKKPKDKMAALAAYFV
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Identical sequences Q7ZWP8
gi|148228452|ref|NP_001082554| gi|28422192|gb|AAH46848| NP_001082554.1.7800

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