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Domain assignment for gi|163914569|ref|NP_001106368| from Xenopus laevis

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|163914569|ref|NP_001106368|
Domain Number 1 Region: 453-557,679-795
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 1.88e-56
Family Phosphate binding protein-like 0.0000000468
Further Details:      
 
Domain Number 2 Region: 65-375
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 8.95e-26
Family L-arabinose binding protein-like 0.0084
Further Details:      
 
Weak hits

Sequence:  gi|163914569|ref|NP_001106368|
Domain Number - Region: 620-652
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.0667
Family Voltage-gated potassium channels 0.023
Further Details:      
 
Domain Number - Region: 1126-1168
Classification Level Classification E-value
Superfamily AMPKBI-like 0.0916
Family AMPKBI-like 0.0084
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|163914569|ref|NP_001106368|
Sequence length 1449
Comment glutamate receptor, ionotropic, N-methyl D-aspartate 2B [Xenopus laevis]
Sequence
MRPTEACYYLKISLIILFYMGCYAQKHPNMDIAVILVGTTDEIAIKDVHEKDDFHHLSVT
PRVALVTMNESDPKSIITRICHLMSDKNVQGVVFADDTDQEAIAQILDFISVQTLTPILG
IHGGSSMIMADKEESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFENK
VRSTIENSFVGWELEEVIHLDMSLDDIDSKIQNQLKKLQSPVILLYCTKEEATYIFEVAH
SVGLTGYGFTWIVPSLVAGDTDTVPAEFPTGLISVSYDEWDYDVPARIRDGIAIITTAAS
TMLSEHNSIPQSKSSCYNIQESRLFEAHMLKRYLINVTFEGRNLSFSEDGYQMHPKLVII
LLNQERKWERVGKYKDRSLKMKYYVWPVFDLYPNSEEHKDEHLSIVTLEEAPFVIVEDVD
PLSGTCMRNTVPCRKQIRIENRTEEGGNYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTN
GKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNG
TVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIG
KAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQV
SGLSDKKFQRPNDFSPAFRFGTVPNGSTERNIRNNYLEMHSYMVKFNQRSVQDALLSLKT
GKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFATTGYGIAIQKDSGWKRYVDLAILQL
FGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIMEHLFF
WQLRHCFMGVCSGKPGVVFSISRGIYSCIHGVAIEDRQSAMNSPSATMNNTHSNILRLLR
TAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSFQPEENLFSDYISEV
ERTFGNLQLKDSNVYQDHFHHHRPHSIGSNSSIDGLYDCDNARFTTQPRSLSKKPLDIGL
PSKHSSTQIGDLYGKFSFKSDRYGGPDDLIRSDVSDISTHTVTYGNIEGNAKRRKQYKDS
LKKRPASAKSRREFDEIELAYRRRQRSPDHKRYFRDKEGLRDFYLDQFKTKENNPHWEHV
DLTHIYAERADDFKHETSCTNRQHQKHAGEFVQTDRKHGSGGNAWEKNVSNMEWEDRASN
NFCRNCPSKMHNYTGQNANRPACIRCEVCKKAGNLYDISEDNSLQDLDARPIPAPNSKYP
QSPSNGKAQKRNRSKLHRQHSYDTFVDLQKEDVTLAPRSVSLKDKERFLDGSPYSHMFEM
PNETSFTSKSHGPSHNPGGYMLSRSLYPDRVTQNPFIPTFGDDQCLLHGSKPYYFRQPAI
GGLKGRSDFHGAGKSLTAQHSGPPGHFQKDICIGNQPNACVSNNKNPTSFNNSTNGHVYE
KLSSIESDV
Download sequence
Identical sequences A9QW73
gi|161328593|gb|ABX60544| gi|163914569|ref|NP_001106368| NP_001106368.1.7800

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