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Domain assignment for gi|214237|gb|AAA49740| from Xenopus laevis

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|214237|gb|AAA49740|
Domain Number 1 Region: 440-579,696-856
Classification Level Classification E-value
Superfamily Substrate-binding domain of HMG-CoA reductase 7.06e-112
Family Substrate-binding domain of HMG-CoA reductase 0.00000000067
Further Details:      
 
Domain Number 2 Region: 582-698
Classification Level Classification E-value
Superfamily NAD-binding domain of HMG-CoA reductase 5.23e-44
Family NAD-binding domain of HMG-CoA reductase 0.00000172
Further Details:      
 
Weak hits

Sequence:  gi|214237|gb|AAA49740|
Domain Number - Region: 46-219
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 0.00034
Family Multidrug efflux transporter AcrB transmembrane domain 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|214237|gb|AAA49740|
Sequence length 883
Comment 3-hydroxy-3-methylglutaryl-coenzyme A reductase [Xenopus laevis]
Sequence
MLSRLFRMHGQFVASHPWEVIVGTVTLTICMMSMNMFTGNDKICGWNYACPKFEEDVLSS
DIIILTITRCIAILYIYFQFQNLRQLGSKYILGIAGLFTIFSSFVFSTVVIHFLDKELTG
LNEALPFFLLLIDLSKASALAKFALSSNSQDEVRDNIARGMAILGPTFTLEALVECLVIG
VGTMSGVRQLEIMCCFGCMSVLANYFAFMTFFPACVSLVLELSRESREGRPIWQLSQFAS
VLEEEEDNKPNPVTQRVKMIMSLGLVLVHAHSRWISEPSSQNSTSISDHEVTTMLDDMMP
KRVEPSMPLWQFYLSRMVTMDVEQIITLGLALLLAVKYIFFEQTETESTFSMKNPIISPV
AVQKKQIESCCRREPEQEKTVHVSTTEEASSKEETEAVIKPLPLETSPKAKFIVGDSSPL
ELSPEDKNTMFDLPEEPRPLDECVRILKNPDKGAQYLTDAEVISLVNAKHIPAYKLETMM
ESPREGVAIRRQMLSDKLPQRSALQSLPYKNYNYSLVMGACCENVIGYMPIPVGVAGPLL
LNNKEYQVPMATTEGCLVASTNRGCRAIMLGGGAKSRVLADGMTRGPVVRLPTACDAAEV
KAWLDSAEGFKVIKDAFDSTSRFARLGRLQNCVAGRNLYIRFQSKTGDAMGMNMISKVTE
QALARLQEEFPDLHVLAVSGNYCTDKKPAAINWIEGRGKSVVCEAIIPAKVVREVLKSST
EALVEVNINKNFIGSAMAGSIGGYNAHAANIVTAIYIACGQDAAQNVGSSNCITIMEATG
PTYEDLYISCTMPSIEIGTVGGGTNLAPQQACLQMLGVQGASTETPGKNACQLAQIVCST
VMAGELSLMAALAAGHLVKSHMVHNRSKINLQDLPGTCTKKAA
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Identical sequences P20715
NP_001081280.1.7800 gi|123347|sp|P20715| gi|148222950|ref|NP_001081280| gi|214237|gb|AAA49740|

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