SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for Glyma08g10550.2|PACid:16270664 from Glycine max v109

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Glyma08g10550.2|PACid:16270664
Domain Number 1 Region: 112-256
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.15e-48
Family B3 DNA binding domain 0.0051
Further Details:      
 
Domain Number 2 Region: 773-853
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000105
Family PB1 domain 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Glyma08g10550.2|PACid:16270664
Sequence length 904
Sequence
MKLSSPGFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNRE
VDGHIPNYPSLPPQLICQLHNLTMHADTETDEVYAQMTLQPLNPQEQKGAYLPAELGTPS
KQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFR
HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVL
SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRM
LFETEESSVRRYMGTITGISDLDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
TFPMYPSPFPLRLKRPWPPGLPLFHGLKDDDFGINSSLMWLRDTDRGLPSLNFQGIGVSP
WMQPRLDPSMVNYQSDMYQAMAAAALQDMWTSNPSKQHPTSSIQFQQPQNFPNQTSPLMQ
TQLLQQSPSQQAFPNSQENPHPSPSQSQAQTQTHFQQHLQHQHSFNNQNQHHLLPQQQQQ
PQQPQLQQQQVVDHQQISSVVSTMSQFVSAAQSQSPPMQAISSLGHQQSFSDSNGNPTTT
AIVSPLHSILDSFPQDDTSHLLSLPRSTSWVPVQHSTAWPPSKRVVVDPLLSSGASQCVL
PQVEQLGQPHSTMAQNGIALPAFPGRECTIEGSNDPQNHLLFGVNIEPSSLLMHNGMSSL
KGVSSNSDSPTIPFQSSNYLNTTGPDSSLNPGMTHNIGETGFLQTPENGGQGNPSNKTFV
KVYKSGSFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLG
DGPWPEFVNSVGYIKILSPQEVQQMGNNELELLNSVPIQRLSNGVCEDPRNLSTGITTVG
SLNY
Download sequence
Identical sequences I1KRX3
Glyma08g10550.2|PACid:16270664 XP_003531170.1.40590

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]