SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for Glyma13g20370.1|PACid:16290957 from Glycine max v109

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Glyma13g20370.1|PACid:16290957
Domain Number 1 Region: 109-218
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 6.02e-29
Family B3 DNA binding domain 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Glyma13g20370.1|PACid:16290957
Sequence length 659
Sequence
MITFMDTKEKLKEVERCLDPQLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPVNFKTC
PKVPPFVPCRVVAVKYMADPETDEVYAKLKLVPLNANDVDYDHDVIGAETRDKPASFAKT
LTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRH
LLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFP
MPYSGFSPFLREDDNRILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVY
YPRASTPEFCVKASLVEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVADPLNW
PNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHFSPFSPPRKKLRLPQHPDFPL
DGQIPLPTLPNNLLGPNNTNQFGCLLESTPAGMQGARHAHYGLSLSDLHLSKLQSGLSSA
GFPPLDHAATPMKVSNNRHCKSLASICPSSSVDTLSPVLTRNCSTDGNVNKVTNFFDGFG
SALHQQGLHEHSSCERFQWCKDNHQEIEANMETGHCKVFMESEDVGRTMDLSLLRSYDEL
HRKLADMFGIEKSEMLSRVLYCDSVGAIKHIGDEPFSDFTRTAKRLTILMDSGSNNVGV
Download sequence
Identical sequences Glyma13g20370.1|PACid:16290957 Glyma13g20370.2|PACid:16290958

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]