SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|83319646|ref|YP_424398.1| from Mycoplasma capricolum subsp. capricolum ATCC 27343

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|83319646|ref|YP_424398.1|
Domain Number 1 Region: 3-233
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.78e-65
Family Lesion bypass DNA polymerase (Y-family), catalytic domain 0.0000614
Further Details:      
 
Domain Number 2 Region: 240-354
Classification Level Classification E-value
Superfamily Lesion bypass DNA polymerase (Y-family), little finger domain 5.49e-20
Family Lesion bypass DNA polymerase (Y-family), little finger domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|83319646|ref|YP_424398.1|
Sequence length 408
Comment ImpB/MucB/SamB family protein [Mycoplasma capricolum subsp. capricolum ATCC 27343]
Sequence
MFNKTIIHIDMDAFFASCMQLKHPELKNKPIVISNSFDKSIISAASYEARKYNIKAAMPL
FKAKKLYPKIISIRADMNFISNISSQIWEFIKTNYTNKIEIASIDEAYLDVSDLILNIDV
LQLAKNIQKDIYNHFNLTCSLGIGFNRFSAKMSTSLNKPNGITLTTITNFKHNIWPIPIN
KMYGVGESSIKILNHTKIKTIKDLALLSDAQIYELLNKKGLVLKNEALGLGSDYINYLSS
EYKSISKETTLNTPIYQYDEIETIILNLSKFITNKLVKNQLLCKTIEIKIRYKIDEKIFD
KQKHLTSKHKQITLKNHTNDLEKIYNSAIDCFYNLYEQNKGILLIGVGVSKLIHKNQNWV
QLDINNQINIDKKQIDNALKIENMIFNINKKFKKPVIWKAKDLKKSSK
Download sequence
Identical sequences Q2SS65
gi|83319646|ref|YP_424398.1| WP_011387298.1.66603 340047.MCAP_0423

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]