SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|83319987|ref|YP_424432.1| from Mycoplasma capricolum subsp. capricolum ATCC 27343

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|83319987|ref|YP_424432.1|
Domain Number 1 Region: 431-521
Classification Level Classification E-value
Superfamily PTS system IIB component-like 6.1e-22
Family PTS system, Lactose/Cellobiose specific IIB subunit 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|83319987|ref|YP_424432.1|
Sequence length 525
Comment PTS system mannitol-specific transporter subunit IIBC [Mycoplasma capricolum subsp. capricolum ATCC 27343]
Sequence
MELKKKIGFFKTKADIDSSLIQNAKFSKNKVKKHIQKIGSFMAGMIMPTVSILIAWGLIT
AMFLGKYVDGKWVATGWFNFEAFGQLVGPVMKWLIPILIAYTAGNMVYQKRGGMLAGFLI
VCAIIGNDFLYKTVMKDWTFGSNGTAVSQTNPPNQIVGAMIISPLLVFIIKKIELTYVNR
VKPGYEMLVKNFSLAGLAIIFGLSIFWIWPFIMYGISYAMIAIINLFTKLPWIFPFMAIF
TEPLRAVFLNNALNWGVLIPIGLKEVETAGFSAFFMVGGNPGPGFGLLIAYMIWRKQQRA
AAGGASVIQLIGGIHEVHYVYILSEPIMVLATISGAFTSLSIVKIFGGGAVAAISPGSLI
SVIAMSVTAKRILVNAIAVFLGAIISFIVASVIMLIKKKNNSVVMNVQVGDFGVKFSNQE
QKQNTQFDWTKVKTIVVACDAGVGSSAMAAGILKKWVKDNQIQVNVSNCAVKDLTNDIDV
IITMNNFVEFAKEKSPNAYVFGVDKFLGQNIYDPIKKELLKWKEW
Download sequence
Identical sequences Q2SS31
340047.MCAP_0458 gi|83319987|ref|YP_424432.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]