SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|PhycaF7|100204|estExt_fgenesh1_kg.C_130036 from Phytophthora capsici

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|PhycaF7|100204|estExt_fgenesh1_kg.C_130036
Domain Number 1 Region: 4-313
Classification Level Classification E-value
Superfamily Carbamate kinase-like 5.94e-61
Family PyrH-like 0.0000155
Further Details:      
 
Domain Number 2 Region: 415-498
Classification Level Classification E-value
Superfamily ACT-like 5.39e-21
Family Aspartokinase allosteric domain-like 0.0042
Further Details:      
 
Domain Number 3 Region: 333-409
Classification Level Classification E-value
Superfamily ACT-like 4.27e-18
Family Aspartokinase allosteric domain-like 0.0011
Further Details:      
 
Domain Number 4 Region: 511-672
Classification Level Classification E-value
Superfamily NAD(P)-binding Rossmann-fold domains 0.00000000551
Family Alcohol dehydrogenase-like, C-terminal domain 0.095
Further Details:      
 
Weak hits

Sequence:  jgi|PhycaF7|100204|estExt_fgenesh1_kg.C_130036
Domain Number - Region: 653-854
Classification Level Classification E-value
Superfamily Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.000785
Family Homoserine dehydrogenase-like 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|PhycaF7|100204|estExt_fgenesh1_kg.C_130036
Sequence length 894
Sequence
MADKFVVHKFGGTSVGSADCFAKVADIVSAIESPRVAVVVSAIGGKPKVTDLLISLLELA
KQRRTAECEEILETLRKKHHDVVSALLPPEVGEPIEKAIARDLQSVSELLRSISIMQAYN
DNVVEFISGHGEIWSAKILTAVLSEKVQQDGKKHIFRFVDAREFLTVESDNEHGPVVQYD
LSEKKMNDILKNEGGDELTHLVVTGFICSTVEGVMTTLKRDGSDFTASICGRVLHANSVT
IWTDVSGVLSADPRRVPESQILPEISYQEAMELAYFGAKVIHPKTMAPAIVEDIPIYIRN
TFEPEHPGTKISDRKKVELKRTMSNGTPTARNIVSGFSTVDDLALFNIEGSGMVGVHGTS
SRLFSALDRVKVNVVLIAQASSEHSICFAVPMDCAEVAKDVINETFFKEIHVGHIDKAEY
IAPISIIAAVGDQMNQTPGVCARFFGALGRAKINVLAISQGSSERNISAVVHYKDSAAAL
RAVHSSFFLSDQTLSIGLMGLEFEENETNSIGVALLKQYHQQREFLKQRFNVDIRVRAIG
THISSQMLLDVDGDITEEALASRKNEFVPFDRNKFLDHVCADHLPHWLIIDVSNSFHHVK
DLYPQWLERKVHVMTSNINVSSASTELHNAMQEMAVQNELTYDPEATLAIGVPIFNTIQN
FIQTGDDIQRVEYSGSRFLHAMFDTVFALPEPANADLEAIMKDLMAEYKNEFSVRDIVDD
VMGVRSAKKAIMIAREMGYDIELKDADIESPWEPSATVAGSQDEVGAWSYDYLLEHLVKA
SAPLKEQIAKTAADPKQALQLRQMSYIDAATGKISVRVEALPPTHSFASLKGRQGGFAFY
TLRHSLHPVVVTGPIADCSITAGSLFGSTLFLARNCGARAHNCGHKPCKINTKN
Download sequence
Identical sequences jgi|PhycaF7|100204|estExt_fgenesh1_kg.C_130036

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]