SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for jgi|PhycaF7|40349|fgenesh1_kg.C_scaffold_0000726 from Phytophthora capsici

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|PhycaF7|40349|fgenesh1_kg.C_scaffold_0000726
Domain Number 1 Region: 133-528
Classification Level Classification E-value
Superfamily ClpP/crotonase 1.78e-98
Family Biotin dependent carboxylase carboxyltransferase domain 0.0000000239
Further Details:      
 
Domain Number 2 Region: 15-116
Classification Level Classification E-value
Superfamily ClpP/crotonase 4.26e-20
Family Biotin dependent carboxylase carboxyltransferase domain 0.0000373
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|PhycaF7|40349|fgenesh1_kg.C_scaffold_0000726
Sequence length 571
Sequence
GVRYAERLEQFNVSIAGETSRAYQDVFTLTYACGRSVGIGAYLVRLGHRTVQNATHSPII
LTGYQALNKLVGKEVYTSNDQLGGVKIMHTNGVTHLTAKNHLSGIYSILEWLSFVPAVRR
GPLPIRDLTGVDEIERTVDFCPKDKSTQYDPRALLAGKVDEATGKWVSGLMDKDSFRETL
DGWAKSVIVGRGRLGGIPVGVVVTEVRTSEKIIPADPATPASQENLMQQAGQVWFPDSAH
KTATAIKDFKGEDLPLFILANWRGFSGGQRDMFDEVLKFGAAIVDGLVNYEQPVFVYIPP
FAELRGGAWAVVDPTINEGIMEMYADPQGRGGVLEPAGLIEIKYRKKQLLQTMHRLDDKL
KQLTARLAELSPEEKETEGSKISAEIKTREDTLLPIYVQVATEFGDLHDTPGRMKAVGCI
RQVVPWSNSRKFFYWRLKRQLAEFSLRREVVAASAGGPRATTFVGSEQILKGWFTEAVNG
GRVPRQQNVSVSELWSHGDSDVLLWLKSDKEWIASRVADLRQEQMASQVVEIGRKDPKAA
VAGILEVLNLLSDKDREEAVAALRRGSIFHK
Download sequence
Identical sequences jgi|PhycaF7|40349|fgenesh1_kg.C_scaffold_0000726

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]