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Domain assignment for Solyc01g108130.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc01g108130.2.1
Domain Number 1 Region: 120-218
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.92e-22
Family B3 DNA binding domain 0.0056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc01g108130.2.1
Sequence length 336
Comment genomic_reference:SL2.40ch01 gene_region:87253005-87257799 transcript_region:SL2.40ch01:87253005..87257799+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein At3g19184 (AHRD V1 *-*- Y3918_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MEERNFIPVKRRTKSCKKRQQQVEPHTLKSTSHSSASTSTQTDPLSMIKTVQLDRKKMIP
KKPRSVKSKAKQVKSNHPRKAESHSIKRKGSKRTRINDLYDDVEAKYSVMERAEKVLSSL
PDEFPSFAKCMLPSNVAHGFWLHLPKSFCNMHLPSSDTTVILVDEWGNEYKTSYLLERNG
LSAGWRGFSISHRLLKGDLLIFRLIEPCKMKVYIVRVNGQEVVDAALCLMYWETLNTSTE
LDLVRKDKRKRKKAKHLAEPFFVDLSKPKEHVQNDSHCTVDLNVSPSEHRSENNSEDLDS
EVLQGSDVTNRLQSNEICCSETSFLHDNPHKSVDCR
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Identical sequences K4B329
Solyc01g108130.2.1 Sopim01g108130.0.1 Solyc01g108130.2.1 XP_004230782.1.44838

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