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Domain assignment for Solyc02g090710.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc02g090710.2.1
Domain Number 1 Region: 160-258
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 9.61e-22
Family B3 DNA binding domain 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc02g090710.2.1
Sequence length 526
Comment genomic_reference:SL2.40ch02 gene_region:46809258-46814499 transcript_region:SL2.40ch02:46809258..46814499+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein Os01g0234100 (AHRD V1 ***- Y1341_ORYSJ); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MKIKVVHRSEPPNQERVSIPYPDMPKKEVFDEEQENQQLGTQEPEPEPDFAIPKMGDDNL
SLVDASIPINSITPSTQTPISSLLGKRRRKPKEMVDQISTIPFRKKRVFKKQSQSSNGVA
VAGCRSISTKLERATADGSGSATQMKSPIIIRAEEFLLSIGNEYPSFMKLLVRSHVGSCF
WMGLPVPFCKNHLPRKDTPVILESETGEEFEIKYIAEKTGLSAGWRKYAAAHKLVEGDVL
VFQLVEPTRFKVYVIRANDLKEVDGALSLLNLDAPAKQSDAEGAIGNNIKKRQKKSLPLT
VVQKRRRKEDLSKQLVPLEAQSGNDSDEVASEILEGSRSSGLAVNFRDIKSLEEFQILVN
GVCIDSELPEHIRRKYYELCCSKNAFLHDRLLQGLHCKLVAGMIFEVVNIADMVRACKLS
TPRKEFDKWEKSLKSFELLGMNVGFLRTRLRWLLSLAFDSEGASDTKRYWDAKKEWSRAE
DEIRNLEMKLEELKQASGKYVADVEALKSKAESYELMFQGEVNAPW
Download sequence
Identical sequences K4BCM0
Solyc02g090710.2.1 Solyc02g090710.2.1 Sopim02g090710.0.1 XP_004232039.1.44838

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