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Domain assignment for Solyc03g007140.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc03g007140.2.1
Domain Number 1 Region: 29-124
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.55e-22
Family B3 DNA binding domain 0.0021
Further Details:      
 
Domain Number 2 Region: 374-460
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000000706
Family B3 DNA binding domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc03g007140.2.1
Sequence length 468
Comment genomic_reference:SL2.40ch03 gene_region:1727613-1733932 transcript_region:SL2.40ch03:1727613..1733932+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein Os01g0905400 (AHRD V1 *-*- Y1054_ORYSJ); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MVHHNEACEMCTRTCMLIHGQRDPSPIVNSFFKVMIDKLFSKILYFPPRFARLVSHLTDQ
ETYLEDSSGQQWRVGICNHNGSLAIRQGWRTFSSEHGLKVGDFLVFHYIQGQHFVVQIYG
TSGCQKINSYNGTHLGKKRPRTNSTETSHDELSPETDINLRKKWNSTPSVTAIPESERAG
HQPVTTTFASNIDAETGEQQIVPQEEGTSDVLQGENRPHNHTDIISQRESSSVDVVPLEM
ELLTLKAPFLDVKITQTEKISGPVNDISLLGQTDENDHHVGLISSTSLISAENGTSAKET
RVDKLELKEMEANTRCPSKNLNGKEPKITEKDGQVYPDAVIGNNMVIKSEPADSGDTSFP
DAGNFSCSLRVDGRNFLELPQSWPQVIVGRRKMGKIIIYLKGPDNRCWPIIYHENFGSKI
LAGNWALFAAVYGLKPGDECLFQLSNQSKRMFTVHVAHKVDVTQTTLS
Download sequence
Identical sequences K4BED7
Sopim03g007140.0.1 XP_004234163.1.44838 Solyc03g007140.2.1 Solyc03g007140.2.1

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