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Domain assignment for Solyc04g007000.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc04g007000.1.1
Domain Number 1 Region: 201-296
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.83e-29
Family B3 DNA binding domain 0.0000149
Further Details:      
 
Domain Number 2 Region: 65-121
Classification Level Classification E-value
Superfamily DNA-binding domain 1.57e-17
Family GCC-box binding domain 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc04g007000.1.1
Sequence length 372
Comment evidence_code:10F0H1E1IEG genomic_reference:SL2.40ch04 gene_region:728928-730046 transcript_region:SL2.40ch04:728928..730046+ go_terms:GO:0003677,GO:0016564 functional_description:"Ethylene-responsive transcription factor 4 (AHRD V1 *-** ERF78_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MEVSCIDQEISTTSDSPSTISPAGSPRQMGSGVSVVTDADSTNGVEAESKNTTITNNNNN
KLPSSKFKGVVPQPNGRWGAQIYEKHQRIWLGTFNGEEEAARAYDIAAQRFRGRDAVTNF
KPLFDFQTEEIEISFLNSRSKVEIVEMLRKHTYNDELQHAKKVYNNNTFEMNGRSTCHTN
TNIATFSLDTNEKVANIASELLFEKVVTPSDVGKLNRLVIPKQHAERYFPLVAKVNKNDN
TSKGVLLNFEDMNGKMWRFRYSYWNSSQSYVLTKGWSRYVKEKKLKAGDIVSFKRCSGVE
IEDKLLIDSKNRIIRGEQVKMVRLFGVNICKVQDVSNNVVVEKNMSVGKRMREMELLAFE
CSKKQRVIIDAL
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Identical sequences E1U2K4
Sopim04g007000.0.1 Solyc04g007000.1.1 Solyc04g007000.1.1 XP_004236999.1.44838

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