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Domain assignment for Solyc08g006130.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc08g006130.1.1
Domain Number 1 Region: 143-257
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.00000243
Family B3 DNA binding domain 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc08g006130.1.1
Sequence length 274
Comment evidence_code:10F0H0E0IEG genomic_reference:SL2.40ch08 gene_region:864469-865427 transcript_region:SL2.40ch08:864469..865427- functional_description:"B3 domain-containing protein At1g05920 (AHRD V1 *-*- Y1592_ARATH); contains Interpro domain(s) IPR005508 Protein of unknown function DUF313 "
Sequence
MVQENNTNCESIDGIIRDDKCEWWSKKNMNDSSYLEYIKRNEERKKTKSIRKMKEKRKNE
MINPEPIEKFQDFEVPVIPKIDSLSVITEPIEKIQDFEVPVIPMIEKPKKKRRKNRVSEV
VMPEELKKKIEELGVSISKVSLVIEKQLYKTDLSETHMRLSIPVNQVVNSNEFLNAQEKG
ILNSRDSCNRISTIKFNLIEPSLEICNINLTKWPMKSSYIYVLLNDWMSVHQRNGLKVNM
MVQLWFFRKDEDPWLALVVVPRDWGVQKSNRSIN
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Identical sequences K4CIA2
Sopim08g006130.0.1 Solyc08g006130.1.1 Solyc08g006130.1.1

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