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Domain assignment for Solyc08g083400.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc08g083400.2.1
Domain Number 1 Region: 47-152
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.09e-29
Family B3 DNA binding domain 0.0000134
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc08g083400.2.1
Sequence length 334
Comment genomic_reference:SL2.40ch08 gene_region:63026330-63027661 transcript_region:SL2.40ch08:63026330..63027661+ go_terms:GO:0006355 functional_description:"Auxin response factor 24 (AHRD V1 *-*- D9HNV1_MAIZE); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MNFFSDGRGFNDQGPFSHPDFSHQQRSTTNSSDMADEVGESNTIEREHMFDKVVTPSDVG
KLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDTNGKPWRFRYSYWNSSQSYVMTKGWSR
FVKEKKLDAGDIVSFQRGVGELGKDRLFIDWKRRPNAPDHLHFMTNHHLHNNLYRSNIQY
PAAAWDRPLFLQPPDQSHLQYSLEPAPGSMSQQQQSHGSSPNYYYDTCNFINSRTTVVNG
NPCPSGSVVYLRSGSAQVPQQAGLMQLRGHSNSSTSGRVVEPVVFDSVPVVQGKAAAKRF
RTFNDYDTNRPAATEEESFDKGKASMSLNLDLDI
Download sequence
Identical sequences K4CPY4
Solyc08g083400.2.1 Sopim08g083400.0.1 Solyc08g083400.2.1

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