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Domain assignment for Solyc09g083290.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc09g083290.2.1
Domain Number 1 Region: 109-217
Classification Level Classification E-value
Superfamily CAD & PB1 domains 1.5e-22
Family PB1 domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc09g083290.2.1
Sequence length 236
Comment genomic_reference:SL2.40ch09 gene_region:64364269-64367389 transcript_region:SL2.40ch09:64364269..64367389+ go_terms:GO:0005515 functional_description:"Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein "
Sequence
MDLKETELCLGLPGGGGGGGELIRDNNNNNNKVNGKRGFSETVDLKLNFHQASDDISCAM
ENNKMKSSVTTTKEVVCNKDPIKPPAKAQVVGWPPVRSFRKNVMAQKSNTEESEKTTAAF
VKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTNGNYGSQGMIDFMNESKLMDLLN
SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRI
Download sequence
Identical sequences G9HPW2
Solyc09g083290.2.1 NP_001266070.1.44838 Sopim09g083290.0.1 Solyc09g083290.2.1

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