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Domain assignment for Solyc10g053890.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc10g053890.1.1
Domain Number 1 Region: 23-121
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.8e-19
Family B3 DNA binding domain 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc10g053890.1.1
Sequence length 166
Comment evidence_code:10F0H0E0IEG genomic_reference:SL2.40ch10 gene_region:49646837-49647884 transcript_region:SL2.40ch10:49646837..49647884- go_terms:GO:0006355 functional_description:"B3 domain-containing protein Os01g0905400 (AHRD V1 ***- Y1054_ORYSJ); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MKLLEMMGAFYDNEDGLLINGKKVISFFKVMILETFLQVLCFPPKIARSVSYLTDLEISF
EDSYGRRWMATVCNYNGSLAIRQGWDKFSAEHDLKVGEFLVFHYVSDDLNFIVQIFGTSG
CEKIKFSCNIGKEKPKERTYQEITTTEECQSGKLFVHKFFRVILFL
Download sequence
Identical sequences K4D0Y7
Solyc10g053890.1.1 Solyc10g053890.1.1

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