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Domain assignment for Solyc10g086130.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc10g086130.1.1
Domain Number 1 Region: 114-222
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.7e-28
Family B3 DNA binding domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc10g086130.1.1
Sequence length 631
Comment evidence_code:10F0H1E0IEG genomic_reference:SL2.40ch10 gene_region:64394738-64396728 transcript_region:SL2.40ch10:64394738..64396728- go_terms:GO:0005634,GO:0006355 functional_description:"Auxin response factor 3 (AHRD V1 ***- A4L9W4_GOSHI); contains Interpro domain(s) IPR010525 Auxin response factor "
Sequence
MFLQNLLMADNKSNCFDSRLWQACAGTMVKMPAVDSIVLYFPQGHAEHAGVNVEFRSDVK
IPSYIPCRVSSIKYMAERETDEVFAKIRLTPVRLSEFFETPEEEGMVKIGSDNSRKPLSF
AKTLTQSDANNGGGFSVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIYRGTP
ERHLLTTGWSTFVNQKKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWWFPSV
GNLTIPRGGFSAFLRDDHNTNSSWSLINRGNVKAESVIEATKLATNGQPFEVIFYPQSTT
PEFFVKASRVKAALQIPWCSGMRFKMPFETEDLVISWFMGTISSVQANDPSQWPDSPWRM
LQVTWDEPNLLHNVMCVNPWLVEPVSNMPTINFNPYTPPLKKLRLSHTSDFPLNGHLPMS
GFPNNHLEFSIDPPMSSFPIHHLLRPYGCPPNNTPVGMQGARHAPYNLSLPDIHTNNLLS
SLSPVGFPSLHHVVASPNTSNNTMIPKPSRNAGISSLLTLGSSTQTNKKFDSEKTTQFVL
FGQPIVIEQQTSQSNSRISVSPRHATNSFSDGNEYKKENTSDSSDTSFVHNSVPDYLPSK
SFRSEENVEIGHSKVFIESEDIGQTKQLGEW
Download sequence
Identical sequences K4D447
Sopim10g086130.0.1 Solyc10g086130.1.1 Solyc10g086130.1.1

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