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Domain assignment for Solyc00g196060.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc00g196060.2.1
Domain Number 1 Region: 16-87
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000000000602
Family B3 DNA binding domain 0.0096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc00g196060.2.1
Sequence length 354
Comment genomic_reference:SL2.40ch00 gene_region:18727880-18730776 transcript_region:SL2.40ch00:18727880..18730776+ go_terms:GO:0005634,GO:0006355 functional_description:"Auxin response factor 6 (AHRD V1 ***- E0AD21_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor "
Sequence
MYNSLCIYKGINCIICQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRAN
RPQTVLPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYH
TRVSVGMRFRMLFETEESSIRRYMGTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQP
RVSLWEIEPLTTFPMYPSPFSLRLKRPWPPGLPSFPGLSNGDMTMNSQLPWLHGGMGDQG
IQSLNFQGFGVTPFMQPRFDASMLGLQPDILQAMAALDSSKLANQPLMQFQHIPSTSASS
IQSQLLHPSNLQHTFLQGLPENQLISQAQMLQQQLQCHQSYNTQQQQLQRQXXX
Download sequence
Identical sequences Solyc00g196060.2.1 Solyc00g196060.2.1

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