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Domain assignment for Solyc01g095880.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc01g095880.1.1
Domain Number 1 Region: 61-163
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.32e-16
Family B3 DNA binding domain 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc01g095880.1.1
Sequence length 179
Comment evidence_code:10F0H0E0IEG genomic_reference:SL2.40ch01 gene_region:78774213-78774752 transcript_region:SL2.40ch01:78774213..78774752+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein At2g31720 (AHRD V1 ***- Y2172_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MTTIRLFGNNITVLRLFGVQFSPLNNNNVQQRDDRVMNMPDLLPPSLRLNIESVRGSEPV
HMGRKYLENSDTNSSLSRFLIPAECATNLLQHMTESEREKIQSDDDKGIDISVMDPKGDL
HNMKFTEWKSLKRLVFNRGWNKLVENNQLHKGDLLSLWHYRSFNNKPCFAVNIIPKPKQ
Download sequence
Identical sequences K4AZX7
Sopim01g095880.0.1 Solyc01g095880.1.1 Solyc01g095880.1.1

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