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Domain assignment for Solyc01g106230.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc01g106230.2.1
Domain Number 1 Region: 5-98
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.18e-20
Family B3 DNA binding domain 0.00037
Further Details:      
 
Domain Number 2 Region: 227-328
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 7.65e-17
Family B3 DNA binding domain 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc01g106230.2.1
Sequence length 336
Comment genomic_reference:SL2.40ch01 gene_region:85950723-85962787 transcript_region:SL2.40ch01:85950723..85962787- go_terms:GO:0006355 functional_description:"B3 domain-containing protein At5g60142 (AHRD V1 *-*- Y5142_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MEKGFVKIFSPENSGKRLKIPTSFTYYKNRKLPMKINLRDRFGNMWPVGVNKIGGNLYFQ
YGWEKFIEDNSVEVGDFLVFDYDGNKMFDFKLLGRTKCEKNGVGGLKAEEMIVEHQKSRE
SKEKNWASDSCNSFSSYDNDVEYMGERDEDEDEDEDKDEEYKETKKVACYVEDEEEDDED
EEEEDEGENQRTNTHKKEALRSKAFACKVRNRHDHFGVDIFKSGRATQPKNPYFVAKIRS
KRRDQLYVPVDVVKDYKLELPSSMTIRDSIGREFVTKLNKWKDGRIWLVGGWRSLCRWNL
VEKNDHCICEFVRGKRNKDLHLRVQVLREGESSVTL
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Identical sequences K4B2J3
XP_004230633.2.44838 XP_004231373.1.44838 XP_019067400.1.44838 XP_019067402.1.44838 Solyc01g106230.2.1 Solyc01g106250.2.1 Sopim01g106230.0.1 Sopim01g106250.0.1 Solyc01g106230.2.1 Solyc01g106250.2.1

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