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Domain assignment for Solyc01g108140.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc01g108140.2.1
Domain Number 1 Region: 122-220
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.02e-23
Family B3 DNA binding domain 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc01g108140.2.1
Sequence length 224
Comment genomic_reference:SL2.40ch01 gene_region:87261228-87266226 transcript_region:SL2.40ch01:87261228..87266226+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein At3g19184 (AHRD V1 ***- Y3918_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MAELEKKLTYEECRLKRIEENKKRWQELKLTMLAEDVHNATNPKPSPMKKAKPTVRQEVD
RSAVRRSNRVADKPPPNYKEVPIEPLGRPRSYKRKDLLNRVYAADEDRQYAIGRAEQLQS
ELDVDFPSFVKPMLQSHVTGGFWLGLPVHFCKTHLPKHDEYITLVDENGDEFQTKYLALK
TGLSGGWRGYALDHELIDGDALVFQLVAPTRFKVYIIRVNQVED
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Identical sequences K4B330
Solyc01g108140.2.1 Solyc01g108140.2.1 XP_004230784.1.44838 Sopim01g108140.0.1

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