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Domain assignment for Solyc02g077560.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc02g077560.2.1
Domain Number 1 Region: 157-264
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.89e-40
Family B3 DNA binding domain 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc02g077560.2.1
Sequence length 747
Comment genomic_reference:SL2.40ch02 gene_region:37038134-37044666 transcript_region:SL2.40ch02:37038134..37044666+ go_terms:GO:0003700 functional_description:"Auxin response factor 3 (AHRD V1 **** Q2LAJ4_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor "
Sequence
MMCGLIDLNTVDNDDAGEETTAPVSLDSPASSSAASGSSDLTSSTTPAVASVCMELWHAC
AGPLISLPKKGSAVVYLPQGHLEHLSEYPSIACNLPPHVFCRVVDVKLQADAATDEVYAQ
VSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGKSITPHMFCKTLTASDTSTHGGFSVPRR
AAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVS
GDAVLFLRTGDGELRLGVRRAAQAKTCSSYLAPCSKPLNVSGIVDAVNVISSRNAFNICY
NPRDSSSDFIVPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSNVDPVRWP
GSKWRCLLVRWDDLDVSRHNRVSPWEIEPSGSAPVPSSLVMPSAKRTRVGFPISKADFPI
PREGIAVSDFGEPSRFQKVLQGQEILRMHAPYGGLDARSPRPAGTRCFPGFPSSGISRMG
NSIRPLFGDTDKSHESIGFSESLRFNKVLQGQEIFTSPPYGRAQAGIQMQEKSRTGIFVG
IQVPNHGNRWPAPNQDNNTPCKPINPVSASSPPSALNFQHPSPPASKFQAMFNHKHDLVN
QASLDLSENCCRYPYLSSGSHTEDISQKEGTQGISSFGFLKEQKQTGLSYLSLGTQSSFK
GNQNLVSTCKTGCRIFGFPLTESKISATRADTPSEAVYSHGLETTFLPSSDGKLQPGPPL
MTNVVGTNFTKVNDLYAARDVLLDIAL
Download sequence
Identical sequences K4B8Y1
XP_010315886.1.44838 Solyc02g077560.2.1 Solyc02g077560.2.1 Sopim02g077560.0.1

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