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Domain assignment for Solyc02g090170.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc02g090170.2.1
Domain Number 1 Region: 22-123
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 9.02e-21
Family B3 DNA binding domain 0.0042
Further Details:      
 
Domain Number 2 Region: 253-342
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 6.67e-19
Family B3 DNA binding domain 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc02g090170.2.1
Sequence length 366
Comment genomic_reference:SL2.40ch02 gene_region:46379891-46381662 transcript_region:SL2.40ch02:46379891..46381662+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein LOC_Os12g40090 (AHRD V1 ***- Y1209_ORYSJ); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MATICERCKVLEKQKYWEEFDKQHKFFKIMINDFRRRLRIPQKFVTCFKNSHKLLGQKIL
TGPSGNTWLVEVIRTEKDYVFCNGWEVFVKDHSLEIADMLVFKMDGFSAFDVMIFDASAC
EKETTFFVKKNRNPCKHPDEVTDEHTTEQQSSEDEPSNDDDVTDEDDNIQEPTRGRKSSR
GKQYQFQSLQSSKGKKMKKILVAKQDNRRRKCTPMSSRKKNVEPEEKRPMYSNRRRVSEK
EKMRVHQLASRHTSSVPSLLMTMQPTHVYMGQLKLPKEWAQKNMRKISETITLRIPSSRR
TWSASIRCRMEGLVIQSGWDDFAMDNDLEEFDICVFELAQGGKHDSKPVILDVYIYPVEN
EIMRPL
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Identical sequences K4BCG8
Solyc02g090170.2.1 Solyc02g090170.2.1 XP_004233644.1.44838 Sopim02g090170.0.1

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