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Domain assignment for Solyc03g043580.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc03g043580.1.1
Domain Number 1 Region: 13-110
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.75e-19
Family B3 DNA binding domain 0.0044
Further Details:      
 
Domain Number 2 Region: 221-311
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.3e-16
Family B3 DNA binding domain 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc03g043580.1.1
Sequence length 323
Comment evidence_code:10F0H0E1IEG genomic_reference:SL2.40ch03 gene_region:11000307-11001597 transcript_region:SL2.40ch03:11000307..11001597+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein At1g49475 (AHRD V1 *-*- Y1475_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MANEFHGSSLRSSSPNNPKFIQIITSLDELRRLRIPVVFAKRHCENMLNPVFLEAPHGKS
WEVEVENSQGQIWLAKGWSDFCDYYSISVKSVLMFTYNPRCHFSVAIYDQSKTEIEYPID
KDIESDEQEEDILFAQANANIIEEDILILQSNANVIEEDIPILQSNANVIEDEEEHIPVN
CPQTNANVIEQHKEVGEANSISEKVGPNNYSSRYSLVDLTGDNPFFEMVIKKSHATCMAI
PLRFAQQTDIINMKNMRLVNEEGVEWKVEIEYARSMVIIKQGWTAFRKDNKIANGETCLF
KLIQGPIANVLQVQKIPTPLCLQ
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Identical sequences K4BFX9
Solyc03g043580.1.1 Sopim03g043580.0.1 Solyc03g043580.1.1 XP_004234708.1.44838

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