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Domain assignment for Solyc03g111410.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc03g111410.2.1
Domain Number 1 Region: 22-118
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.12e-19
Family B3 DNA binding domain 0.0056
Further Details:      
 
Domain Number 2 Region: 269-335
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000412
Family B3 DNA binding domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc03g111410.2.1
Sequence length 343
Comment genomic_reference:SL2.40ch03 gene_region:56052504-56063403 transcript_region:SL2.40ch03:56052504..56063403- go_terms:GO:0006355 functional_description:"B3 domain-containing protein Os01g0905400 (AHRD V1 *-*- Y1054_ORYSJ); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MESANVACDKCKKDCLLIHRKRVPSFYKAMTDKSCFQVLIVPPNFARSASHLVDKVTLVK
DASGLRWPVTVCDYQGLLAIQQGWPEFASKHDLVVGDHLVFHYTQRQHFTVQIFDMNGYE
KIIFCCDTDKGEKRAATRVEETTRAGDAQFDQDGRLCLHQSRFEMPASKPPAEGLLPLRE
DGIKATGMVSRPAEDILLLGPKDKKCKKASQFDSGEEEANGNGKVNKSESAGLGDTPSFP
ANNYSSLVEIYGPDFLELPGSWRDLLQRPTRERWIIFLRGPDKRIWPTYYTSLLPPYYSR
RPSVDVLSRGWKEVAAAYGMNAKDHCLFELADKQNRIFDIRKI
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Identical sequences K4BK04
XP_010319048.1.44838 Solyc03g111410.2.1 Solyc03g111410.2.1 Sopim03g111410.0.1

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