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Domain assignment for Solyc04g064830.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc04g064830.2.1
Domain Number 1 Region: 153-241
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.35e-17
Family B3 DNA binding domain 0.0072
Further Details:      
 
Domain Number 2 Region: 13-108
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.53e-16
Family B3 DNA binding domain 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc04g064830.2.1
Sequence length 255
Comment genomic_reference:SL2.40ch04 gene_region:55121110-55123177 transcript_region:SL2.40ch04:55121110..55123177+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein Os03g0212300 (AHRD V1 ***- Y3123_ORYSJ); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MQSSSPELPISRRFFKVMVPGFHSKLTIPPAFFPKLKGDNLEKGTIIKGKDIWNVEINRS
EKGIISFDKGWEEFVQNHDLRVGDFAVFEHLGDMRFSVTLLDSTGCDKKLLEKSEVVPSQ
EKKKKVKSAQPGIEKRKVEGDQPHYQCMKGSSEFTARIKEYNVRKRSPYMHIPTEFCQSN
ALFQNTTMTLTGPSGKSCPVSLRICNGGKTLYACITRGWHDFFSSNKLKVGDVCLFQLDR
SKSDSNSIAIDVRVL
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Identical sequences K4BT74
Sopim04g064830.0.1 Solyc04g064830.2.1 Solyc04g064830.2.1 XP_004237741.1.44838

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