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Domain assignment for Solyc06g007530.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc06g007530.2.1
Domain Number 1 Region: 135-237
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.24e-24
Family B3 DNA binding domain 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc06g007530.2.1
Sequence length 293
Comment genomic_reference:SL2.40ch06 gene_region:1515845-1518702 transcript_region:SL2.40ch06:1515845..1518702- go_terms:GO:0006355 functional_description:"B3 domain-containing protein Os05g0481400 (AHRD V1 ***- Y5814_ORYSJ); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MANDKTNSYEELRRQRVLDNKKRFEDLGILNISKNLSDITKSEKKSDYKTELRRVRQKAK
DVYLSEPRRSARARNPVPTYRDEIDIELPSLRKRSKFSSSWASYLARPLEEVKVASYEEK
VLALKCAEKLQSNLQSDKPFFIKTMVRSHVYSCFWLGLPTRFCQDHLPKSTVDVLLVDEE
GLEYEALFIGKRTGLSGGWRAFALDHKLDDGDALVFELVEPTKFKVYIVRASQCSSEVDK
SEAEKEESEAEETPKSETKKKKKSSNKPEVPTIAKEEVSVVVTSATRRSTRRK
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Identical sequences K4C3D4
Solyc06g007530.2.1 XP_004240433.1.44838 XP_019069951.1.44838 Solyc06g007530.2.1

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