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Domain assignment for Solyc07g043620.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc07g043620.2.1
Domain Number 1 Region: 115-259
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 6.41e-49
Family B3 DNA binding domain 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc07g043620.2.1
Sequence length 525
Comment genomic_reference:SL2.40ch07 gene_region:54884781-54890195 transcript_region:SL2.40ch07:54884781..54890195- go_terms:GO:0003700 functional_description:"Auxin response factor 6-1 (AHRD V1 **** D9IUY5_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor "
Sequence
MRVSSSGFNPQPEEAAGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSVQVAASTN
KEVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELG
IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEW
KLRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTLMPS
SVLSSDSMHIGLLAAAAHATATNTRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMR
FRMLFETEESSVRRYMGTITGISDLDPVCWPNSHWRSVKVGWDESTAGERQPRVSLWEIE
PLTTFPMYPSPFSLRLKRPWPSGLPSLPGFPNVGLTMNSPLSWLRGDMGDQGMQSLNFQG
FGATPFMQPRMDASMLGLQPDILQTMTALDPSKLANQSLMQFQHSIPNSSAPLSQIQMLQ
PSHSQHNLIQGFSENHLISQAQMLQQQLQRRQNFNDQQQLLQPQL
Download sequence
Identical sequences K4CEL9
Solyc07g043620.2.1 Solyc07g043620.2.1

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