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Domain assignment for Solyc07g054630.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc07g054630.2.1
Domain Number 1 Region: 284-384
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 7.46e-26
Family B3 DNA binding domain 0.004
Further Details:      
 
Domain Number 2 Region: 11-103
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.73e-16
Family B3 DNA binding domain 0.0035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc07g054630.2.1
Sequence length 578
Comment genomic_reference:SL2.40ch07 gene_region:60218182-60225136 transcript_region:SL2.40ch07:60218182..60225136- go_terms:GO:0006355 functional_description:"B3 domain-containing protein Os11g0197600 (AHRD V1 ***- Y1176_ORYSJ); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MESCSNSYSAGSFYVIVEPSVMDDRQLRLPDKFVREHGDELLDTVKIIVPTDDFWCVGLK
KAGKMIWLHDGWQEFMEHHSVNCWYFLLFKYGQTSCFNVHIFDLAATEIDYQLRSHGYAK
SRDVAQDLSHRKDKIVGDNGFTSSIEIVDLLETEQGPESSAKSSELPHRAKRRKIASGKI
KITRCYETRSKTNKLHDNGQLLNAKNLNISGNGSLTKPVGGKSVRRSIKTPIHSAVATGG
TRKLFTSKQREKSLGRGRYDRRERAQQKVSETSRAIQTAKMFIPENPYFLQILEKYNVER
NYILNIPVEFVRKYMPKTSELIELQDTDGNKWKVRCIRRKLRVLLSKGWLNFVTDNSLLV
GDVCVFELLKNFQAVALILKVHMFRNRVEENSKNLHTGSLFEQTLSTGKNCVLQFDESKH
TKSSDAFEPLSSDRTNHKTDTENSFGQQQEKSVVHGSSGNRRKRGRPMDAEANTDTENSF
GQQQEKSVVHGSSGNRRKRGRPRDAEANTDTENSSRQQEEKSVVHGSSGNRRKGRRLRDA
KGNSATTAAKMFTPENPYFMITLGEYHVVRNYILFQWN
Download sequence
Identical sequences K4CG05
Solyc07g054630.2.1 Solyc07g054630.2.1 Sopim07g054630.0.1

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