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Domain assignment for Solyc08g006190.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc08g006190.1.1
Domain Number 1 Region: 296-390
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.55e-19
Family B3 DNA binding domain 0.004
Further Details:      
 
Domain Number 2 Region: 427-523
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.9e-18
Family B3 DNA binding domain 0.0052
Further Details:      
 
Domain Number 3 Region: 4-95
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.69e-17
Family B3 DNA binding domain 0.0021
Further Details:      
 
Domain Number 4 Region: 151-243
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000000647
Family B3 DNA binding domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc08g006190.1.1
Sequence length 544
Comment evidence_code:10F0H1E0IEG genomic_reference:SL2.40ch08 gene_region:894407-897998 transcript_region:SL2.40ch08:894407..897998+ go_terms:GO:0003700 functional_description:"B3 domain-containing protein Os03g0212300 (AHRD V1 *-*- Y3123_ORYSJ); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MKFAPKKPHFFKPILPNFKHGIKIPVAFCKHLKGCNQEHAILRKSDKKWQVKVNGRLLDE
GWAIFAKENDLQLGDCLIFRHEGDFEFEVSIFGSNHFERVYEQTPKGGEEINHTCNKIIS
QAKTTEKTKLNVKSNEIIPEVEAAENMPLDRPPFIFTVTPYCLTRGHVQLPVQFARDNSL
MNRRCTITIRDEQRSLTFALYSSGARTYIKGQWREFCIANCLKKGDQIMLAIVDNGMNPV
LRFYGNSDVIIFNLKLDLRTNASLQLEVKKPNLDAEEVSSRKEVATVPASTSANANAQFV
SIIHPYAIIRALFYLPLSFARPNGLMRRCKMILKDEKQRSWSVQLEEVGPRFAITKGWRQ
FREANDVQVGDTYKFELIHNGTTPVAYFHRTRANASVQPEEKKPNLDARRVSARSNEADV
PASTCDNANTQFVSTINPHCINSPFIYLPSAFAKSNSLVNRRCKMILRDEKQRSWSVVLA
PMGHHTAITKGWRQFREANGFQVGDTYKFELIDNGTIPIAYFHCEYIYFPSFHYVPPCYA
TLFQ
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Identical sequences K4CIA8
Solyc08g006190.1.1 Solyc08g006190.1.1 Sopim08g006190.0.1

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