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Domain assignment for Solyc08g006280.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc08g006280.1.1
Domain Number 1 Region: 134-232
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.53e-17
Family B3 DNA binding domain 0.0053
Further Details:      
 
Domain Number 2 Region: 449-544
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000000000687
Family B3 DNA binding domain 0.0057
Further Details:      
 
Domain Number 3 Region: 8-99
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000235
Family B3 DNA binding domain 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc08g006280.1.1
Sequence length 565
Comment evidence_code:10F0H0E0IEG genomic_reference:SL2.40ch08 gene_region:955990-960743 transcript_region:SL2.40ch08:955990..960743+ go_terms:GO:0006355 functional_description:"Transcriptional factor B3 family protein (AHRD V1 *-*- D7LIB2_ARALY); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MATMKGYSEKPSFLMFISPSLKQGFTFPDEFLKHLKGHDQYEHAILRWANKNWPVKLNGV
RLEDGLEKFVEQNNLEEGEILSIEYEGNMKFEAIRFDPSKQCEILEVQPRAPKVVKSSDE
SKSKGAATQKHLGHPYFVCTIRPYSFKYGYLCLPLDFVTKNNLRHKIGDLIIRDEKQRSW
NLRLNSFSSKRFVLNGGWPEFSNANDIKEGDEVMFEIVSNEEKQIWQFKKKASNNVKSSL
LVEPPKVKSRKPSQRRDIKAMMVDVVHMPVDKLIHKNKSSFVAKTPKSKSRELRQRQELE
DQTLKAFPHKSFDESNHNIKSAPLAKTPKPKSRRPAERDDFEDRSLEAVTHKPNEPSKLK
LGGLHQRQEFEEGTFEAATHKSLDKPTHKKLKSTPLAEPSQSKPRELPQKQNFEDQTTNV
ATQKPHDESNYYTTSSKEATPLKDDPHKSSDNPCILINVNPYCLVTDTLLIPEKFALAND
LFRIKKCDLIIRDDNDRSWNVTLREHNNYVFIKDGWKKIRDTYYIKEGDQIMFEIVTGGD
KPIWKFHGKISKEFVKMIQQNGLEQ
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Identical sequences K4CIB7
Solyc08g006280.1.1 Sopim08g006280.0.1 Solyc08g006280.1.1 XP_010324533.1.44838

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