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Domain assignment for Solyc08g029090.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc08g029090.2.1
Domain Number 1 Region: 479-579
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.71e-20
Family B3 DNA binding domain 0.005
Further Details:      
 
Domain Number 2 Region: 3-96
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.34e-19
Family B3 DNA binding domain 0.0033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc08g029090.2.1
Sequence length 584
Comment genomic_reference:SL2.40ch08 gene_region:22654683-22657391 transcript_region:SL2.40ch08:22654683..22657391+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein At3g18960 (AHRD V1 *-*- Y3896_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MPPQFFKIILSPHASKLNIPDEFVIKYGADLRDVVFLEVPTGAIWKVELLQNSNGTKYLN
NGWNQFKEYYSIAIGYFLLFQYNGNSHFSVCIFDLSASEIEYLSGPNEHEPPVSRPNCLA
ERHREKPDVGEDLTYATQKRKKSKRNGHSNEVVDPSTSKVTTTNQHRTVDCRYPLRSKQR
KDVKIEKGDVEEGHCNEALDPSTSKVHSKKRTAASLDASNCRYPLRSKQLKEVKVVKGDV
EDHCNKIHLVADPSATKMTTTVRHHEKKTSASFDTSHCRYPLRNKQLKEVKPGKTNAEKD
LLYVAQKAKRKKANNVKLEKGDAEERSKVGDPSASTTTNQHNEKKTTTSLDASHCRCPLR
SKQHKEVKLEQWEAGGNMHNKTPVADSPYCRSQNPSLPASSPSCQPVRVKLEKPDNLFCA
AEKVKGRETNNVKLDTGDLEGNLVAASYKGKYSTASEMTVLGKKKMLPSETQNRDMYFNP
HFTVSMLPAYVSRNFQLEIPADFFKKRVNEEETIVNLRVSNGRSWRAKLFDIQSNCPKME
SSGWRDFVIDNNLKEHDTCVFELNDGIEPMLLDVTIFRATTPVS
Download sequence
Identical sequences K4CJX2
XP_004244892.1.44838 Solyc08g029090.2.1 Solyc08g029090.2.1

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