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Domain assignment for Solyc10g083210.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc10g083210.1.1
Domain Number 1 Region: 44-151
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.09e-30
Family B3 DNA binding domain 0.0000236
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc10g083210.1.1
Sequence length 308
Comment evidence_code:10F0H0E1IEG genomic_reference:SL2.40ch10 gene_region:62400932-62405454 transcript_region:SL2.40ch10:62400932..62405454+ go_terms:GO:0006355 functional_description:"Auxin response factor 1 (AHRD V1 *-*- D9HNS8_MAIZE); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MSITHFSSQNYFFSEHYNFMEESLRNSSSPPKQNSNQLEEIEIPKEHLFEKPLTPSDVGK
LNRLVIPKQNAEKYFPLNDSINDSGEKGFLLSFEDELGKLWKFRYSYWNSSQSYVLTKGW
SRFVKEKKLDAGDVVLFERHRVDGDRQFIGWRRKNGAAVAAASATTVAPPGGGGGWGQIH
PFPSAAGVPYQTDFLHAGRGVMHNQLTTPNGNNTRRQVRLFGVNLECEVDDSSSWSESST
PDGSISSNHHQQSQEYYQSQAGQHYYQYQVHYSNPHANPPASSYNNNHHYNTDMDYSRDV
NQMRYHQG
Download sequence
Identical sequences K4D3A8
Solyc10g083210.1.1 Sopim10g083210.0.1 XP_004249426.1.44838 Solyc10g083210.1.1

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