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Domain assignment for Solyc12g006340.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc12g006340.1.1
Domain Number 1 Region: 113-188
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.62e-29
Family B3 DNA binding domain 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc12g006340.1.1
Sequence length 195
Comment evidence_code:10F0H1E0IEG genomic_reference:SL2.40ch12 gene_region:857256-859108 transcript_region:SL2.40ch12:857256..859108- go_terms:GO:0006355 functional_description:"Auxin response factor 6 (AHRD V1 ***- C7FFK5_SOLLC); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MKVSTSGFNSQPEEGEKKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKE
LNGHIPSYPGLPPQLICQLHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELGTP
SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKF
RHIFRGEFLFRELIE
Download sequence
Identical sequences K4DBH1
XP_010313687.1.44838 Sopim12g006340.0.1 Solyc12g006340.1.1 Solyc12g006340.1.1

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