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Domain assignment for Solyc12g006350.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc12g006350.1.1
Domain Number 1 Region: 113-186
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.35e-28
Family B3 DNA binding domain 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc12g006350.1.1
Sequence length 186
Comment evidence_code:10F0H1E0IEG genomic_reference:SL2.40ch12 gene_region:871641-873422 transcript_region:SL2.40ch12:871641..873422+ go_terms:GO:0003700 functional_description:"Auxin response factor 6 (AHRD V1 **** C7FFK5_SOLLC); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MKVSTSGFNSQPEEGEKKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKE
INGHIPSYPGLPPQLICQLHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELGTL
SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKF
RHIFRG
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Identical sequences K4DBH2
XP_019067187.1.44838 Sopim12g006350.0.1 Solyc12g006350.1.1 Solyc12g006350.1.1

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