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Domain assignment for Solyc05g054180.2.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  Solyc05g054180.2.1
Domain Number - Region: 163-227
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00245
Family PHD domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc05g054180.2.1
Sequence length 488
Comment genomic_reference:SL2.40ch05 gene_region:63284096-63288543 transcript_region:SL2.40ch05:63284096..63288543+ go_terms:GO:0008270 functional_description:"Potyvirus VPg interacting protein (AHRD V1 **-- B0ZZ79_ARAHY); contains Interpro domain(s) IPR004082 Protein of unknown function DUF1423, plant "
Sequence
MAKKLEKEKENGYAEHSVVRNMPNSDKISLRDIARERVDVIADRMRNLPDEYLEKFKYEL
RVILEGSGGAQHRNEFQFLQRLVNCRGELTEGILCLTHRTQLEILVAIKTGIQAFLHPSV
SLSQASLIDIFLYKRCRNIACGSVLPAEECSCEICSKKNGFCNLCMCAICNKFDFEVNTC
RWIGCDLCSHWTHTDCAISNGQIGTGPSVKVGVSSAETLFRCHACSRTSELLGWVKDVFQ
HCAPTWDAEAFVRELDFVRRIFQRSEDARGRKLYWKCEELVEKLKGGVADPMACKVILSF
FQDLDDPSKNQGNDEGARPIAPLEAFGKIADVVQEAIRKMEAVAEEKMRLVKKARLSLEA
CDQELKDKAREVSMLKMERQKKKQQIDDIESIVRLKQAEAEMFDKKAAEARREAERLQQI
TLTKTNKSEEDYTNRYLKQRLCEAEAEKQYIIEKMKLQESSRAAQSSAGGTDPSQIMYSK
IQDLIKNM
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Identical sequences K4C297
Solyc05g054180.2.1 Solyc05g054180.2.1

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