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Domain assignment for Solyc02g036390.1.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc02g036390.1.1
Domain Number 1 Region: 235-605
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 3.01e-85
Family Regulator of chromosome condensation RCC1 0.003
Further Details:      
 
Domain Number 2 Region: 14-123
Classification Level Classification E-value
Superfamily PH domain-like 1.29e-19
Family Pleckstrin-homology domain (PH domain) 0.0091
Further Details:      
 
Domain Number 3 Region: 607-675
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000000264
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc02g036390.1.1
Sequence length 785
Comment evidence_code:10F0H1E0IEG genomic_reference:SL2.40ch02 gene_region:21397954-21401865 transcript_region:SL2.40ch02:21397954..21401865+ go_terms:GO:0008270 functional_description:"Regulator of chromosome condensation domain-containing protein (AHRD V1 *--- D3BDN0_POLPA); contains Interpro domain(s) IPR009091 Regulator of chromosome condensation/beta-lactamase-inhibitor protein II "
Sequence
MSEEHLAIVPSDRAVEQAIIALKKGALLKYGRRGKPKFCPLRLSADEKFLIWYSGEKENK
LSLSAVTNIIRGQNTVNQQKQLKAEMDSQCISLIYGNDDHSLDLICKDKVQAATWFLGLR
AVISRSRHGLVDHMKNKRGVQSCISSPVGYLRRKHNLGFSLKKSRSSQVRSFSRSPTRSF
SDKCNADGGLSCSSDIFLPLSSVHNGMDNVIANSSSDDPRQKRATCVDTAIQYVLRDVFI
WGEGGCFGDAGEVKMDALLPKLMESTTTLDVQTISIGSGHAALVTKQGEVFCWGEGKNGR
LGHKVDIDISCPKIVDSLNGVHVKSVSCGEYHTCALTTSGELYTWGDNLVVERKTRSYWL
PSRVCGSSDGVKISHVACGVWHTGLVSTSGQLFTYGDGTFGALGHGNCKSMAHPKEVESL
RGLCVKSVACGLRHTAALVEISVHDHLKSNHCSVKLFTWGDGDNGNLGHSDNEMKLLPTR
VSQLDDHDFIQVTCASTLTVGLSNTGEVYTMGSLVDRQAKDKSLVAVQEKLKDKFVTQIS
SGSNHVAVLTSKGNVYTWGKGSNGQLGLGDTKNRNFPALVEGLRDRQVEHIACGSNSTAA
ICLHKSISSSDQSVCRGCGTTFRITRKKHNCYNCGHSFCHACCRKKTTNASLSSDKTKTF
RVCDPCFCQLRRASKKEKHSPRQAIDNSQESNSISSRMMSTRKYSSENNQCLDPIESLLD
DFPRWGQVPCPEFLRRGTEHSRNSSPSPTARIMQDKLSESNKFLLEQVSKLRTQVHFPFS
GFLKS
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Identical sequences K4B5T2
Solyc02g036390.1.1 Solyc02g036390.1.1

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